lsting <-as_listing( out,key_cols =c("TRT01A", "CPID", "ASR"),disp_cols =names(out),main_title ="Listing of Adverse Events",main_footer ="(1) Outcome: 1 = fatal; 2 = not recovered/not resolved; 3 = recovered/resolved; 4 = recovered/resolved with sequelae; 5 = recovering/resolving; 6 = unknown.(2) Action taken with study drug: 1 = dose increased; 2 = dose not changed; 3 = dose reduced; 4 = drug interrupted; 5 = drug withdrawn; 6 = not applicable; 7 = unknown.* Study day derived from imputed onset date.** Duration derived from imputed onset date and/or end date.")head(lsting, 20)
Listing of Adverse Events
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Date of
Adverse First Study Study AE Most Caused by Action
Event MedDRA Drug Day of Duration Extreme Study Outcome Treatment Taken
Treatment Center/Patient ID Age/Sex/Race Preferred Term Administration Onset in Days Serious Intensity Drug (1) for AE (2)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A: Drug X BRA-1/id-134 47/M/WHITE dcd B.2.1.2.1 04NOV2020 162 173 No MODERATE No 5 Yes 2
dcd D.1.1.4.2 04NOV2020 196 166 No MODERATE No 5 No 2
dcd A.1.1.1.2 04NOV2020 321 149 Yes MODERATE No 5 Yes 2
dcd A.1.1.1.2 04NOV2020 393 43 Yes MODERATE No 5 No 5
BRA-1/id-42 36/M/BLACK OR AFRICAN AMERICAN dcd C.2.1.2.1 01JAN2020 39 506 No MODERATE Yes 2 No 6
dcd D.1.1.1.1 01JAN2020 64 630 Yes SEVERE Yes 1 No 6
dcd C.2.1.2.1 01JAN2020 95 306 No MODERATE Yes 5 No 2
dcd A.1.1.1.2 01JAN2020 160 259 Yes MODERATE No 2 Yes 2
dcd B.2.2.3.1 01JAN2020 292 50 Yes MILD No 3 No 2
dcd A.1.1.1.2 01JAN2020 459 195 Yes MODERATE No 5 Yes 2
dcd B.1.1.1.1 01JAN2020 470 131 Yes SEVERE Yes 1 No 6
dcd A.1.1.1.2 01JAN2020 475 113 Yes MODERATE No 4 Yes 2
dcd C.1.1.1.3 01JAN2020 496 162 No SEVERE Yes 5 Yes 2
dcd B.1.1.1.1 01JAN2020 641 15 Yes SEVERE Yes 1 Yes 6
BRA-1/id-93 34/F/ASIAN dcd D.1.1.4.2 20JUN2020 44 47 No MODERATE No 5 Yes 2
dcd D.2.1.5.3 20JUN2020 79 300 No MILD Yes 5 No 3
dcd A.1.1.1.1 20JUN2020 136 78 No MILD No 3 Yes 2
dcd D.2.1.5.3 20JUN2020 260 305 No MILD Yes 5 No 2
dcd C.1.1.1.3 20JUN2020 281 106 No SEVERE Yes 5 Yes 2
dcd D.1.1.1.1 20JUN2020 316 250 Yes SEVERE Yes 1 No 6
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(1) Outcome: 1 = fatal; 2 = not recovered/not resolved; 3 = recovered/resolved;
4 = recovered/resolved with sequelae; 5 = recovering/resolving; 6 = unknown.
(2) Action taken with study drug: 1 = dose increased; 2 = dose not changed;
3 = dose reduced; 4 = drug interrupted; 5 = drug withdrawn; 6 = not applicable;
7 = unknown.
* Study day derived from imputed onset date.
** Duration derived from imputed onset date and/or end date.
Experimental use!
WebR is a tool allowing you to run R code in the web browser. Modify the code below and click run to see the results. Altenatively, copy the code and click here to open WebR in a new tab.
Timestamp
Code
Sys.time()
[1] "2024-05-11 17:58:56 UTC"
Session Info
Code
sessionInfo()
R version 4.4.0 (2024-04-24)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 22.04.4 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.20.so; LAPACK version 3.10.0
locale:
[1] C
time zone: Etc/UTC
tzcode source: system (glibc)
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] rlistings_0.2.8 tibble_3.2.1 formatters_0.5.6 scda.2022_0.1.5
[5] scda_0.1.6 dplyr_1.1.4
loaded via a namespace (and not attached):
[1] vctrs_0.6.5 cli_3.6.2 knitr_1.46 rlang_1.1.3
[5] xfun_0.43 stringi_1.8.4 generics_0.1.3 jsonlite_1.8.8
[9] glue_1.7.0 backports_1.4.1 htmltools_0.5.8.1 brio_1.1.5
[13] fansi_1.0.6 rmarkdown_2.26 grid_4.4.0 evaluate_0.23
[17] fastmap_1.1.1 yaml_2.3.8 lifecycle_1.0.4 compiler_4.4.0
[21] codetools_0.2-20 htmlwidgets_1.6.4 testthat_3.2.1.1 pkgconfig_2.0.3
[25] digest_0.6.35 R6_2.5.1 tidyselect_1.2.1 utf8_1.2.4
[29] pillar_1.9.0 magrittr_2.0.3 checkmate_2.3.1 withr_3.0.0
[33] tools_4.4.0
.lock file
Download the .lock file and use renv::restore() on it to recreate environment used to generate this website.