TLG Catalog - Stable
  • Stable
    • Dev
  1. Appendix
  2. Reproducibility
  • Introduction

  • Tables
    • ADA
      • ADAT01
      • ADAT02
      • ADAT03
      • ADAT04A
      • ADAT04B
    • Adverse Events
      • AET01
      • AET01_AESI
      • AET02
      • AET02_SMQ
      • AET03
      • AET04
      • AET04_PI
      • AET05
      • AET05_ALL
      • AET06
      • AET06_SMQ
      • AET07
      • AET09
      • AET09_SMQ
      • AET10
    • Concomitant Medications
      • CMT01
      • CMT01A
      • CMT01B
      • CMT02_PT
    • Deaths
      • DTHT01
    • Demography
      • DMT01
    • Disclosures
      • DISCLOSUREST01
      • EUDRAT01
      • EUDRAT02
    • Disposition
      • DST01
      • PDT01
      • PDT02
    • ECG
      • EGT01
      • EGT02
      • EGT03
      • EGT04
      • EGT05_QTCAT
    • Efficacy
      • AOVT01
      • AOVT02
      • AOVT03
      • CFBT01
      • CMHT01
      • COXT01
      • COXT02
      • DORT01
      • LGRT02
      • MMRMT01
      • ONCT05
      • RATET01
      • RBMIT01
      • RSPT01
      • TTET01
    • Exposure
      • EXT01
    • Lab Results
      • LBT01
      • LBT02
      • LBT03
      • LBT04
      • LBT05
      • LBT06
      • LBT07
      • LBT08
      • LBT09
      • LBT10
      • LBT10_BL
      • LBT11
      • LBT11_BL
      • LBT12
      • LBT12_BL
      • LBT13
      • LBT14
      • LBT15
    • Medical History
      • MHT01
    • Pharmacokinetic
      • PKCT01
      • PKPT02
      • PKPT03
      • PKPT04
      • PKPT05
      • PKPT06
      • PKPT07
      • PKPT08
      • PKPT11
    • Risk Management Plan
      • RMPT01
      • RMPT03
      • RMPT04
      • RMPT05
      • RMPT06
    • Safety
      • ENTXX
    • Vital Signs
      • VST01
      • VST02
  • Listings
    • ADA
      • ADAL02
    • Adverse Events
      • AEL01
      • AEL01_NOLLT
      • AEL02
      • AEL02_ED
      • AEL03
      • AEL04
    • Concomitant Medications
      • CML01
      • CML02A_GL
      • CML02B_GL
    • Development Safety Update Report
      • DSUR4
    • Disposition
      • DSL01
      • DSL02
    • ECG
      • EGL01
    • Efficacy
      • ONCL01
    • Exposure
      • EXL01
    • Lab Results
      • LBL01
      • LBL01_RLS
      • LBL02A
      • LBL02A_RLS
      • LBL02B
    • Medical History
      • MHL01
    • Pharmacokinetic
      • ADAL01
      • PKCL01
      • PKCL02
      • PKPL01
      • PKPL02
      • PKPL04
    • Vital Signs
      • VSL01
  • Graphs
    • Efficacy
      • FSTG01
      • FSTG02
      • KMG01
      • MMRMG01
      • MMRMG02
    • Other
      • BRG01
      • BWG01
      • CIG01
      • IPPG01
      • LTG01
      • MNG01
    • Pharmacokinetic
      • PKCG01
      • PKCG02
      • PKCG03
      • PKPG01
      • PKPG02
      • PKPG03
      • PKPG04
      • PKPG06

  • Appendix
    • Reproducibility

  • Index

On this page

  • Session Info
    • .lock file
  • Edit this page
  • Report an issue
  1. Appendix
  2. Reproducibility

Reproducibility


Session Info

Code
sessionInfo()
R version 4.5.0 (2025-04-11)
Platform: x86_64-pc-linux-gnu
Running under: Ubuntu 24.04.2 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.26.so;  LAPACK version 3.12.0

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

time zone: Etc/UTC
tzcode source: system (glibc)

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
 [1] digest_0.6.37     R6_2.6.1          codetools_0.2-20  fastmap_1.2.0    
 [5] pkgcache_2.2.4    xfun_0.52         magrittr_2.0.3    glue_1.8.0       
 [9] knitr_1.50        htmltools_0.5.8.1 rmarkdown_2.29    lifecycle_1.0.4  
[13] ps_1.9.1          cli_3.6.5         processx_3.8.6    vctrs_0.6.5      
[17] testthat_3.2.3    compiler_4.5.0    tools_4.5.0       brio_1.1.5       
[21] curl_6.3.0        evaluate_1.0.3    pillar_1.10.2     yaml_2.3.10      
[25] htmlwidgets_1.6.4 rlang_1.1.6       jsonlite_2.0.0   

.lock file

Download the .lock file and use renv::restore() on it to recreate environment used to generate this website.

Code
withr::with_options(
  list(renv.verbose = FALSE),
  renv::snapshot("..", lockfile = "../assets/www/renv.lock", prompt = FALSE, force = TRUE)
)

NOTE: Dependency discovery took 10 seconds during snapshot.
Consider using .renvignore to ignore files, or switching to explicit snapshots.
See `?renv::dependencies` for more information.

Download

Source Code
---
title: Reproducibility
---

------------------------------------------------------------------------

{{< include ../_utils/envir_hook.qmd >}}

## Session Info

```{r sessioninfo, message = FALSE}
#| code-fold: show

sessionInfo()
```

### `.lock` file

Download the `.lock` file and use [`renv::restore()`](https://rstudio.github.io/renv/reference/restore.html) on it to recreate environment used to generate this website.

```{r snapshot, message = FALSE, opts.label = "skip_if_testing"}
#| code-fold: true
#| renv.ignore: TRUE

withr::with_options(
  list(renv.verbose = FALSE),
  renv::snapshot("..", lockfile = "../assets/www/renv.lock", prompt = FALSE, force = TRUE)
)
```

[Download](../assets/www/renv.lock)

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