Helper Function to Parse Genes — h_parse_genes • teal.modules.hermes

This helper function takes a vector of words and tries to match them with the id and name columns of possible gene choices.

Usage

h_parse_genes(words, choices)

Arguments

words: (character)
containing gene IDs or names.
choices: (data.frame)
containing id and name columns of the new choices.

Value

The subset of choices which matches words in ID or name.

Examples

h_parse_genes(
  c("a", "2535"),
  data.frame(id = as.character(2533:2537), name = letters[1:5])
)
#>     id name
#> 1 2533    a
#> 3 2535    c