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Changelog

Source: NEWS.md

teal.goshawk 0.2.0.9016

teal.goshawk 0.2.0

Breaking Changes

  • Adapted all modules to use teal_data objects.

Enhancements

  • Updated the documentation and vignettes to demonstrate method to pass teal_data object to teal::init().
  • Removed Show Warnings modals from modules.
  • Added teal.logger functionality for logging changes in shiny inputs in all modules.

Miscellaneous

  • Specified minimal version of package dependencies.
  • Fix the tm_g_gh_lineplot bug causing an out-of-bounds error that stops the plot from working.
  • Enhance the tm_g_gh_correlationplot module and fix related bugs.

teal.goshawk 0.1.15

Enhancements

Breaking changes

  • Constraints range is calculated on the filtered data instead of the unfiltered.
  • Replaced chunks with simpler qenv class.
  • Replaced datasets argument containing FilteredData with the new arguments data (tdata object) and filter_panel_api (FilterPanelAPI).

Miscellaneous

  • Deprecated tm_g_gh_scatterplot. Use tm_g_gh_correlationplot instead.
  • Removed scda package dependency from examples.

teal.goshawk 0.1.14

Enhancements

  • Added teal.reporter reporting into all the package modules.
  • Added optional argument plot_relative_height_value to tm_g_gh_lineplot to control initial value of the relative plot height slider.
  • Implemented nestcolor with slight refactoring to tm_g_gh_lineplot and added nestcolor in examples with no custom color manuals.

Miscellaneous

  • Fixed minor type coercion warning in srv_arbitrary_lines.
  • Updated modules to not use datasets with suffix _FILTERED so the package works with the breaking changes in teal.slice.

teal.goshawk 0.1.13

Miscellaneous

  • Added a template to the pkgdown site.
  • Updated package authors.

teal.goshawk 0.1.12

Breaking Changes

  • Converted the hline parameter of tm_g_gh_lineplot to three parameters: hline_arb, hline_arb_color and hline_arb_label.

Miscellaneous

  • Added basic logging to the modules.
  • Rewrote modules to use moduleServer and updated calls to teal.devel modules which have also been written to use moduleServer.
  • Replaced calls to teal::root_modules with teal::modules following deprecation of teal::root_modules.
  • Adjusted package imports to take into account changes to the teal framework.

teal.goshawk 0.1.11

Enhancements

  • Added a UI input component to add additional arbitrary horizontal lines to tm_g_gh_spaghettiplot, tm_g_gh_boxplot, tm_g_gh_density_distribution_plot as well as two additional UI input components to add an additional horizontal and an additional vertical line to tm_g_gh_correlationplot.

Bug Fixes

  • Fixed an error in tm_g_gh_boxplot when no facet variable is selected.

Miscellaneous

  • Updated R version requirement to R >= 3.6.
  • Removed dependency on test.nest package.
  • Removed dependency on utils.nest package and replaced its functions with equivalents from the checkmate package.

teal.goshawk 0.1.10

New Features

  • Lab normal range and LOQs horizontal line feature in tm_g_gh_spaghettiplot, tm_g_gh_boxplot and tm_g_gh_correlationplot.

Breaking Changes

  • Allow arbitrary horizontal line arguments in tm_g_gh_spaghettiplot, tm_g_gh_boxplot, tm_g_gh_density_distribution_plot and tm_g_gh_correlationplot and vertical line arguments in tm_g_gh_correlationplot. This functionality has changed the arguments required to use the modules:
    • hline replaced by hline_arb, hline_arb_color and hline_arb_label in the above modules.
    • vline replaced by vline_arb_var, vline_arb_color and vline_arb_label in tm_g_gh_correlationplot.

Bug Fixes

  • Fixed bug in tm_g_gh_boxplot module that always used the AVISITCD variable as the Visit Column of the table.

Miscellaneous

  • Updated LICENCE and README with new package references.
  • Updated examples and documentation using scda synthetic data instead of random.cdisc.data.
  • Added error_on_lint: TRUE to .lintr.
  • Replaced tidyr’s gather and spread with pivot_wider and pivot_longer in package.

teal.goshawk 0.1.9

Enhancements

  • Updated tm_g_gh_correlationplot and tm_g_gh_scatterplot encodings to have a checkbox to facet by the treatment variable instead of a drop down menu.
  • Updated the starting line type to be solid instead of dashed in tm_g_gh_lineplot.

teal.goshawk 0.1.8

Enhancements

  • g_lineplot
    • Updated the plot to remove x-axis label when x-axis is numeric and has no data in the corresponding y-axis variable.
    • Added slider to control the relative size of the plot and tables.
  • Replaced function brushedPoints with clean_brushedPoints in tm_g_gh_boxplot, tm_g_gh_correlationplot, tm_g_gh_scatterplot and tm_g_gh_spaghettiplot.

Bug fixes

  • Fixed infinite reactive loop inside of toggle_slider_server.

Miscellaneous

  • Renamed toggle.R file to toggleable.R file to be consistent with the accepted correct spelling of the word.

teal.goshawk 0.1.7

Enhancements

  • tm_g_gh_lineplot
    • Added a table to display summary statistics.

Bug fixes

  • tm_g_gh_lineplot
    • Fixed displaying the number of messages, warnings and errors on the Debug Info button.
    • Fixed treatment variable having values with with symbols (e.g. ‘:’).
    • Allow treatment variables with different arm levels.

Miscellaneous

  • Reduced minimum number of records required in dataset to either 1 or 2 in all modules.

teal.goshawk 0.1.6

Enhancements

  • tm_g_gh_boxplot
    • Changed slider title from “Transparency” to “Alpha”.
  • tm_g_gh_correlationplot
    • Added facet_var argument and UI drop down.
  • tm_g_gh_density_distribution_plot
    • Rug plot option added.
  • tm_g_gh_lineplot
    • Argument changes: font_size –> plot_font_size.
    • Line and symbol type can now be configured. especially useful if line splitting is used.
    • Can set minimum records threshold for rendering data point in plot.
    • Table font size can now be controlled.
  • tm_g_gh_scatterplot
    • Added facet_var argument and UI drop down.
  • tm_g_gh_spaghettiplot
    • Changed slider title from “Transparency” to “Alpha”.

General

  • Moved code argument to cdisc_dataset (from cdisc_data) in examples.
  • Implemented new plot_with_settings functionality to all modules with support for plot resizing, zooming, and downloading functionality.
  • Added drop down selector for treatment ARM.

teal.goshawk 0.1.5

  • templ_ui_params_vars now uses optionalSelectInput from teal.
  • shape_choices argument to tm_g_gh_lineplot can be either a character vector or choices_selected.

teal.goshawk 0.1.4

  • bug fix in correlation plot module related to axis ranges
  • reflect changes in data filter panel re-factoring
  • modification to correlation module to pass data for data driven LLOQ and ULOQ footnote

teal.goshawk 0.1.3

  • Added .data to PARAMCD in new functions related to sliders and reactivity.
  • Fixing doc and other small fixes.
  • Added toggleable slider to all modules.
  • Added data driven data constraints UI rendering.

teal.goshawk 0.1.2

  • Added checkbox input to control the following:
    • Box: Toggle LoQ legend on/off.
    • Correlation: Toggle LoQ legend on/off, toggle visit facetting on/off.
    • Density: Toggle combined treatment line on/off.
  • Modified line-plot vertical axis range to match parameter value and CI range.

teal.goshawk 0.1.1

  • First release.