![[Experimental]](figures/lifecycle-experimental.svg)
Pagination of a listing. This can be vertical for long listings with many
rows and/or horizontal if there are many columns. This function is a wrapper of
formatters::paginate_to_mpfs() and it is mainly meant for exploration and testing.
Usage
paginate_listing(
lsting,
page_type = "letter",
font_family = "Courier",
font_size = 8,
lineheight = 1,
landscape = FALSE,
pg_width = NULL,
pg_height = NULL,
margins = c(top = 0.5, bottom = 0.5, left = 0.75, right = 0.75),
lpp = NA_integer_,
cpp = NA_integer_,
colwidths = NULL,
tf_wrap = !is.null(max_width),
rep_cols = NULL,
max_width = NULL,
col_gap = 3,
fontspec = font_spec(font_family, font_size, lineheight),
verbose = FALSE,
print_pages = TRUE
)Arguments
- lsting
(
listing_dforlist)
the listing or list of listings to paginate.- page_type
(
string)
name of a page type. Seepage_types. Ignored whenpg_widthandpg_heightare set directly.- font_family
(
string)
name of a font family. An error will be thrown if the family named is not monospaced. Defaults to"Courier".- font_size
(
numeric(1))
font size. Defaults to12.- lineheight
(
numeric(1))
line height. Defaults to1.- landscape
(
flag)
whether the dimensions ofpage_typeshould be inverted for landscape orientation. Defaults toFALSE, ignored whenpg_widthandpg_heightare set directly.- pg_width
(
numeric(1))
page width in inches.- pg_height
(
numeric(1))
page height in inches.- margins
(
numeric(4))
named numeric vector containing"bottom","left","top", and"right"margins in inches. Defaults to.5inches for both vertical margins and.75for both horizontal margins.- lpp
(
numeric(1)orNULL)
number of rows/lines (excluding titles and footers) to include per page. Standard is70whileNULLdisables vertical pagination.- cpp
(
numeric(1)orNULL)
width (in characters) of the pages for horizontal pagination.NULL(the default) indicates no horizontal pagination should be done.- colwidths
(
numeric)
vector of column widths (in characters) for use in vertical pagination.- tf_wrap
(
flag)
whether the text for title, subtitles, and footnotes should be wrapped.- rep_cols
(
numeric(1))
number of columns (not including row labels) to be repeated on every page. Defaults to 0.- max_width
(
integer(1),stringorNULL)
width that title and footer (including footnotes) materials should be word-wrapped to. IfNULL, it is set to the current print width of the session (getOption("width")). If set to"auto", the width of the table (plus any table inset) is used. Parameter is ignored iftf_wrap = FALSE.- col_gap
(
numeric(1))
width of gap between columns, in same units as extent inpagdf(spaces under a particular font specification).- fontspec
(
font_spec)
a font_spec object specifying the font information to use for calculating string widths and heights, as returned byfont_spec().- verbose
(
flag)
whether additional informative messages about the search for pagination breaks should be shown. Defaults toFALSE.- print_pages
(
flag)
whether the paginated listing should be printed to the console (cat(toString(x))).
Examples
dat <- ex_adae
lsting <- as_listing(dat[1:25, ], disp_cols = c("USUBJID", "AESOC", "RACE", "AETOXGR", "BMRKR1"))
mat <- matrix_form(lsting)
cat(toString(mat))
#> Study Identifier Unique Subject Identifier Primary System Organ Class Race Analysis Toxicity Grade Continous Level Biomarker 1
#> —————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————
#> AB12345 AB12345-BRA-1-id-134 cl B WHITE 3 6.46299057842479
#> AB12345-BRA-1-id-134 cl D WHITE 3 6.46299057842479
#> AB12345-BRA-1-id-134 cl A WHITE 2 6.46299057842479
#> AB12345-BRA-1-id-134 cl A WHITE 2 6.46299057842479
#> AB12345-BRA-1-id-141 cl B WHITE 3 7.51607612428241
#> AB12345-BRA-1-id-141 cl D WHITE 1 7.51607612428241
#> AB12345-BRA-1-id-141 cl A WHITE 1 7.51607612428241
#> AB12345-BRA-1-id-141 cl A WHITE 2 7.51607612428241
#> AB12345-BRA-1-id-141 cl A WHITE 1 7.51607612428241
#> AB12345-BRA-1-id-141 cl D WHITE 5 7.51607612428241
#> AB12345-BRA-1-id-236 cl B BLACK OR AFRICAN AMERICAN 5 7.66300121077566
#> AB12345-BRA-1-id-236 cl B BLACK OR AFRICAN AMERICAN 5 7.66300121077566
#> AB12345-BRA-1-id-236 cl B BLACK OR AFRICAN AMERICAN 5 7.66300121077566
#> AB12345-BRA-1-id-265 cl C WHITE 2 10.323346349886
#> AB12345-BRA-1-id-265 cl D WHITE 3 10.323346349886
#> AB12345-BRA-1-id-265 cl D WHITE 5 10.323346349886
#> AB12345-BRA-1-id-265 cl C WHITE 4 10.323346349886
#> AB12345-BRA-1-id-42 cl C BLACK OR AFRICAN AMERICAN 2 2.26753940777848
#> AB12345-BRA-1-id-42 cl D BLACK OR AFRICAN AMERICAN 5 2.26753940777848
#> AB12345-BRA-1-id-42 cl C BLACK OR AFRICAN AMERICAN 2 2.26753940777848
#> AB12345-BRA-1-id-42 cl A BLACK OR AFRICAN AMERICAN 2 2.26753940777848
#> AB12345-BRA-1-id-42 cl B BLACK OR AFRICAN AMERICAN 1 2.26753940777848
#> AB12345-BRA-1-id-42 cl A BLACK OR AFRICAN AMERICAN 2 2.26753940777848
#> AB12345-BRA-1-id-42 cl B BLACK OR AFRICAN AMERICAN 5 2.26753940777848
#> AB12345-BRA-1-id-42 cl A BLACK OR AFRICAN AMERICAN 2 2.26753940777848
paginate_listing(lsting, lpp = 10)
#> --- Page 1/8 ---
#> Study Identifier Unique Subject Identifier Primary System Organ Class Race
#> —————————————————————————————————————————————————————————————————————————————————————————————————————
#> AB12345 AB12345-BRA-1-id-134 cl B WHITE
#> AB12345-BRA-1-id-134 cl D WHITE
#> AB12345-BRA-1-id-134 cl A WHITE
#> AB12345-BRA-1-id-134 cl A WHITE
#> AB12345-BRA-1-id-141 cl B WHITE
#> AB12345-BRA-1-id-141 cl D WHITE
#> AB12345-BRA-1-id-141 cl A WHITE
#> AB12345-BRA-1-id-141 cl A WHITE
#>
#> --- Page 2/8 ---
#> Study Identifier Analysis Toxicity Grade Continous Level Biomarker 1
#> ————————————————————————————————————————————————————————————————————————
#> AB12345 3 6.46299057842479
#> 3 6.46299057842479
#> 2 6.46299057842479
#> 2 6.46299057842479
#> 3 7.51607612428241
#> 1 7.51607612428241
#> 1 7.51607612428241
#> 2 7.51607612428241
#>
#> --- Page 3/8 ---
#> Study Identifier Unique Subject Identifier Primary System Organ Class Race
#> —————————————————————————————————————————————————————————————————————————————————————————————————————
#> AB12345 AB12345-BRA-1-id-141 cl A WHITE
#> AB12345-BRA-1-id-141 cl D WHITE
#> AB12345-BRA-1-id-236 cl B BLACK OR AFRICAN AMERICAN
#> AB12345-BRA-1-id-236 cl B BLACK OR AFRICAN AMERICAN
#> AB12345-BRA-1-id-236 cl B BLACK OR AFRICAN AMERICAN
#> AB12345-BRA-1-id-265 cl C WHITE
#> AB12345-BRA-1-id-265 cl D WHITE
#> AB12345-BRA-1-id-265 cl D WHITE
#>
#> --- Page 4/8 ---
#> Study Identifier Analysis Toxicity Grade Continous Level Biomarker 1
#> ————————————————————————————————————————————————————————————————————————
#> AB12345 1 7.51607612428241
#> 5 7.51607612428241
#> 5 7.66300121077566
#> 5 7.66300121077566
#> 5 7.66300121077566
#> 2 10.323346349886
#> 3 10.323346349886
#> 5 10.323346349886
#>
#> --- Page 5/8 ---
#> Study Identifier Unique Subject Identifier Primary System Organ Class Race
#> —————————————————————————————————————————————————————————————————————————————————————————————————————
#> AB12345 AB12345-BRA-1-id-265 cl C WHITE
#> AB12345-BRA-1-id-42 cl C BLACK OR AFRICAN AMERICAN
#> AB12345-BRA-1-id-42 cl D BLACK OR AFRICAN AMERICAN
#> AB12345-BRA-1-id-42 cl C BLACK OR AFRICAN AMERICAN
#> AB12345-BRA-1-id-42 cl A BLACK OR AFRICAN AMERICAN
#> AB12345-BRA-1-id-42 cl B BLACK OR AFRICAN AMERICAN
#> AB12345-BRA-1-id-42 cl A BLACK OR AFRICAN AMERICAN
#> AB12345-BRA-1-id-42 cl B BLACK OR AFRICAN AMERICAN
#>
#> --- Page 6/8 ---
#> Study Identifier Analysis Toxicity Grade Continous Level Biomarker 1
#> ————————————————————————————————————————————————————————————————————————
#> AB12345 4 10.323346349886
#> 2 2.26753940777848
#> 5 2.26753940777848
#> 2 2.26753940777848
#> 2 2.26753940777848
#> 1 2.26753940777848
#> 2 2.26753940777848
#> 5 2.26753940777848
#>
#> --- Page 7/8 ---
#> Study Identifier Unique Subject Identifier Primary System Organ Class Race
#> —————————————————————————————————————————————————————————————————————————————————————————————————————
#> AB12345 AB12345-BRA-1-id-42 cl A BLACK OR AFRICAN AMERICAN
#>
#> --- Page 8/8 ---
#> Study Identifier Analysis Toxicity Grade Continous Level Biomarker 1
#> ————————————————————————————————————————————————————————————————————————
#> AB12345 2 2.26753940777848
#>
paginate_listing(lsting, cpp = 100, lpp = 40)
#> --- Page 1/2 ---
#> Study Identifier Unique Subject Identifier Primary System Organ Class
#> —————————————————————————————————————————————————————————————————————————
#> AB12345 AB12345-BRA-1-id-134 cl B
#> AB12345-BRA-1-id-134 cl D
#> AB12345-BRA-1-id-134 cl A
#> AB12345-BRA-1-id-134 cl A
#> AB12345-BRA-1-id-141 cl B
#> AB12345-BRA-1-id-141 cl D
#> AB12345-BRA-1-id-141 cl A
#> AB12345-BRA-1-id-141 cl A
#> AB12345-BRA-1-id-141 cl A
#> AB12345-BRA-1-id-141 cl D
#> AB12345-BRA-1-id-236 cl B
#> AB12345-BRA-1-id-236 cl B
#> AB12345-BRA-1-id-236 cl B
#> AB12345-BRA-1-id-265 cl C
#> AB12345-BRA-1-id-265 cl D
#> AB12345-BRA-1-id-265 cl D
#> AB12345-BRA-1-id-265 cl C
#> AB12345-BRA-1-id-42 cl C
#> AB12345-BRA-1-id-42 cl D
#> AB12345-BRA-1-id-42 cl C
#> AB12345-BRA-1-id-42 cl A
#> AB12345-BRA-1-id-42 cl B
#> AB12345-BRA-1-id-42 cl A
#> AB12345-BRA-1-id-42 cl B
#> AB12345-BRA-1-id-42 cl A
#>
#> --- Page 2/2 ---
#> Study Identifier Race Analysis Toxicity Grade Continous Level Biomarker 1
#> ————————————————————————————————————————————————————————————————————————————————————————————————————
#> AB12345 WHITE 3 6.46299057842479
#> WHITE 3 6.46299057842479
#> WHITE 2 6.46299057842479
#> WHITE 2 6.46299057842479
#> WHITE 3 7.51607612428241
#> WHITE 1 7.51607612428241
#> WHITE 1 7.51607612428241
#> WHITE 2 7.51607612428241
#> WHITE 1 7.51607612428241
#> WHITE 5 7.51607612428241
#> BLACK OR AFRICAN AMERICAN 5 7.66300121077566
#> BLACK OR AFRICAN AMERICAN 5 7.66300121077566
#> BLACK OR AFRICAN AMERICAN 5 7.66300121077566
#> WHITE 2 10.323346349886
#> WHITE 3 10.323346349886
#> WHITE 5 10.323346349886
#> WHITE 4 10.323346349886
#> BLACK OR AFRICAN AMERICAN 2 2.26753940777848
#> BLACK OR AFRICAN AMERICAN 5 2.26753940777848
#> BLACK OR AFRICAN AMERICAN 2 2.26753940777848
#> BLACK OR AFRICAN AMERICAN 2 2.26753940777848
#> BLACK OR AFRICAN AMERICAN 1 2.26753940777848
#> BLACK OR AFRICAN AMERICAN 2 2.26753940777848
#> BLACK OR AFRICAN AMERICAN 5 2.26753940777848
#> BLACK OR AFRICAN AMERICAN 2 2.26753940777848
#>
paginate_listing(lsting, cpp = 80, lpp = 40, verbose = TRUE)
#> Determining lines required for header content: 0 title and 2 table header lines
#> Determining lines required for footer content: 0 lines
#> Lines per page available for tables rows: 38 (original: 40)
#> --------- ROW-WISE: Checking possible pagination for page 1
#> -> Attempting pagination between 1 and 25 row
#> OK [25 lines]
#> Adjusted characters per page: 80 [original: 80, table inset: 0]
#> ========= COLUMN-WISE: Checking possible pagination for page 1
#> -> Attempting pagination between 1 and 6 column
#> FAIL: selected 6 columns require 172 chars, while only 80 are available.
#> details: [raw: 157 chars (6 cols), rep. cols: 0 chars (0 cols), tot. colgap: 15 chars].
#> -> Attempting pagination between 1 and 5 column
#> FAIL: selected 5 columns require 139 chars, while only 80 are available.
#> details: [raw: 127 chars (5 cols), rep. cols: 0 chars (0 cols), tot. colgap: 12 chars].
#> -> Attempting pagination between 1 and 4 column
#> FAIL: selected 4 columns require 110 chars, while only 80 are available.
#> details: [raw: 101 chars (4 cols), rep. cols: 0 chars (0 cols), tot. colgap: 9 chars].
#> -> Attempting pagination between 1 and 3 column
#> OK [73 chars]
#> ========= COLUMN-WISE: Checking possible pagination for page 2
#> -> Attempting pagination between 4 and 6 column
#> FAIL: selected 3 columns require 109 chars, while only 80 are available.
#> details: [raw: 84 chars (3 cols), rep. cols: 16 chars (1 cols), tot. colgap: 9 chars].
#> -> Attempting pagination between 4 and 5 column
#> OK [70 chars]
#> ========= COLUMN-WISE: Checking possible pagination for page 3
#> -> Attempting pagination between 6 and 6 column
#> OK [46 chars]
#> --- Page 1/3 ---
#> Study Identifier Unique Subject Identifier Primary System Organ Class
#> —————————————————————————————————————————————————————————————————————————
#> AB12345 AB12345-BRA-1-id-134 cl B
#> AB12345-BRA-1-id-134 cl D
#> AB12345-BRA-1-id-134 cl A
#> AB12345-BRA-1-id-134 cl A
#> AB12345-BRA-1-id-141 cl B
#> AB12345-BRA-1-id-141 cl D
#> AB12345-BRA-1-id-141 cl A
#> AB12345-BRA-1-id-141 cl A
#> AB12345-BRA-1-id-141 cl A
#> AB12345-BRA-1-id-141 cl D
#> AB12345-BRA-1-id-236 cl B
#> AB12345-BRA-1-id-236 cl B
#> AB12345-BRA-1-id-236 cl B
#> AB12345-BRA-1-id-265 cl C
#> AB12345-BRA-1-id-265 cl D
#> AB12345-BRA-1-id-265 cl D
#> AB12345-BRA-1-id-265 cl C
#> AB12345-BRA-1-id-42 cl C
#> AB12345-BRA-1-id-42 cl D
#> AB12345-BRA-1-id-42 cl C
#> AB12345-BRA-1-id-42 cl A
#> AB12345-BRA-1-id-42 cl B
#> AB12345-BRA-1-id-42 cl A
#> AB12345-BRA-1-id-42 cl B
#> AB12345-BRA-1-id-42 cl A
#>
#> --- Page 2/3 ---
#> Study Identifier Race Analysis Toxicity Grade
#> ——————————————————————————————————————————————————————————————————————
#> AB12345 WHITE 3
#> WHITE 3
#> WHITE 2
#> WHITE 2
#> WHITE 3
#> WHITE 1
#> WHITE 1
#> WHITE 2
#> WHITE 1
#> WHITE 5
#> BLACK OR AFRICAN AMERICAN 5
#> BLACK OR AFRICAN AMERICAN 5
#> BLACK OR AFRICAN AMERICAN 5
#> WHITE 2
#> WHITE 3
#> WHITE 5
#> WHITE 4
#> BLACK OR AFRICAN AMERICAN 2
#> BLACK OR AFRICAN AMERICAN 5
#> BLACK OR AFRICAN AMERICAN 2
#> BLACK OR AFRICAN AMERICAN 2
#> BLACK OR AFRICAN AMERICAN 1
#> BLACK OR AFRICAN AMERICAN 2
#> BLACK OR AFRICAN AMERICAN 5
#> BLACK OR AFRICAN AMERICAN 2
#>
#> --- Page 3/3 ---
#> Study Identifier Continous Level Biomarker 1
#> ——————————————————————————————————————————————
#> AB12345 6.46299057842479
#> 6.46299057842479
#> 6.46299057842479
#> 6.46299057842479
#> 7.51607612428241
#> 7.51607612428241
#> 7.51607612428241
#> 7.51607612428241
#> 7.51607612428241
#> 7.51607612428241
#> 7.66300121077566
#> 7.66300121077566
#> 7.66300121077566
#> 10.323346349886
#> 10.323346349886
#> 10.323346349886
#> 10.323346349886
#> 2.26753940777848
#> 2.26753940777848
#> 2.26753940777848
#> 2.26753940777848
#> 2.26753940777848
#> 2.26753940777848
#> 2.26753940777848
#> 2.26753940777848
#>