All Standard Plots in Default Setting — autoplot,AnyHermesData-method • hermes

This generates all standard plots - histogram and q-q plot of library sizes, density plot of the (log) counts distributions, boxplot of the number of number of non-zero expressed genes per sample, and a stacked barplot of low expression genes by chromosome at default setting.

Usage

# S4 method for AnyHermesData
autoplot(object)

Arguments

object: (AnyHermesData)
input.

Value

A list with the ggplot objects from draw_libsize_hist(), draw_libsize_qq(), draw_libsize_densities(), draw_nonzero_boxplot() and draw_genes_barplot()

functions with default settings.

Examples

result <- hermes_data
autoplot(result)