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rmpt03Duration of Exposure for Risk Management Plan Table.

Source: R/rmpt03.R
rmpt03.Rd

The rmpt03 table provides an overview of duration of exposure.

Usage 

rmpt03_main(
  adam_db,
  summaryvars = "AGEGR1",
  show_tot = TRUE,
  row_split_var = NULL,
  col_split_var = "SEX",
  overall_col_lbl = "All Genders",
  ...
)

rmpt03_pre(adam_db, summaryvars = "AGEGR1", ...)

rmpt03

Format

An object of class chevron_t of length 1.

Arguments

adam_db

(list of data.frames) object containing the ADaM datasets

summaryvars

(string) variables to be analyzed. The label attribute of the corresponding columns in adex table of adam_db is used as label.

show_tot

(flag) whether to display the cumulative total.

row_split_var

(string) the name of the column that containing variable to split exposure by.

col_split_var

(string) additional column splitting variable.

overall_col_lbl

(string) name of the overall column. If NULL, no overall level is added.

...

not used.

Value

the main function returns an rtables object.

the preprocessing function returns a list of data.frame.

Details

  • Person time is the sum of exposure across all patients.

  • Summary statistics are by default based on the number of patients in the corresponding N row (number of non-missing values).

  • Does not remove zero-count rows unless overridden with prune_0 = TRUE.

Functions

  • rmpt03_main(): Main TLG function

  • rmpt03_pre(): Preprocessing

Examples 

pre_data <- dunlin::propagate(syn_data, "adsl", "AGEGR1", "USUBJID")
#> 
#> Updating: adae with: AGEGR1
#> Updating: adsaftte with: AGEGR1
#> Updating: adcm with: AGEGR1
#> Updating: addv with: AGEGR1
#> Updating: adeg with: AGEGR1
#> Updating: adex with: AGEGR1
#> Updating: adlb with: AGEGR1
#> Updating: admh with: AGEGR1
#> Skipping: adrs
#> Updating: adsub with: AGEGR1
#> Skipping: adtte
#> Updating: advs with: AGEGR1
run(rmpt03, pre_data)
#>                                                   F                            M                       All Genders        
#>                                         Patients     Person time     Patients     Person time     Patients     Person time
#>   Age Group                             (N=231)        (N=231)       (N=169)        (N=169)       (N=400)        (N=400)  
#>   ————————————————————————————————————————————————————————————————————————————————————————————————————————————————————————
#>   <65                                 231 (100.0%)      27364      168 (99.4%)       22124      399 (99.8%)       49488   
#>   >=65                                  0 (0.0%)          0          1 (0.6%)         212         1 (0.2%)         212    
#>   Total patients number/person time   231 (100.0%)      27364      169 (100.0%)      22336      400 (100.0%)      49700