Run the pipeline — run • chevron

Run the pipeline

Usage

run(
  object,
  adam_db,
  auto_pre = TRUE,
  verbose = FALSE,
  ...,
  user_args = list(...)
)

# S4 method for chevron_tlg
run(
  object,
  adam_db,
  auto_pre = TRUE,
  verbose = FALSE,
  ...,
  user_args = list(...)
)

Arguments

object: (chevron_tlg) input.
adam_db: (list of data.frames) object containing the ADaM datasets
auto_pre: (flag) whether to perform the default pre processing step.
verbose: (flag) whether to print argument information.
...: extra arguments to pass to the pre-processing, main and post-processing functions.
user_args: (list) arguments from ....

Examples

run(mng01, syn_data, auto_pre = TRUE, dataset = "adlb")
#> $`Alanine Aminotransferase Measurement`

#> 
#> $`C-Reactive Protein Measurement`

#> 
#> $`Immunoglobulin A Measurement`

#> 
#> attr(,"class")
#> [1] "gg_list" "list"