LBT06 Table 1 (Default) Laboratory Abnormalities by Visit and Baseline Status Table 1.
lbt06.RdThe LBT06 table produces the standard laboratory abnormalities by visit and
baseline status summary.
Usage
lbt06_main(
adam_db,
arm_var = "ACTARM",
lbl_overall = NULL,
page_var = "PARAMCD",
...
)
lbt06_pre(adam_db, ...)
lbt06_post(tlg, prune_0 = FALSE, ...)
lbt06Arguments
- adam_db
(
listofdata.frames) object containing theADaMdatasets- arm_var
(
string) the arm variable used for arm splitting.- lbl_overall
(
string) label used for overall column, if set toNULLthe overall column is omitted- page_var
(
string) variable name prior to which the row split is by page.- ...
not used.
- tlg
(
TableTree,Listingorggplot) object typically produced by amainfunction.- prune_0
(
flag) remove 0 count rows
Details
Only count
"LOW"or"HIGH"values forANRINDandBNRIND.Lab test results with missing
ANRINDvalues are excluded.Split columns by arm, typically
ACTARM.Keep zero count rows by default.
Note
adam_dbobject must contain anadlbtable with columns"AVISIT","ANRIND","BNRIND","ONTRTFL", and"PARCAT2", and column specified byarm_var.
Examples
run(lbt06, syn_data)
#> Visit
#> Abnormality at Visit A: Drug X B: Placebo C: Combination
#> Baseline Status (N=134) (N=134) (N=132)
#> ———————————————————————————————————————————————————————————————————————————————————
#> Alanine Aminotransferase Measurement
#> WEEK 1 DAY 8
#> Low
#> Not low 3/39 (7.7%) 2/40 (5%) 1/37 (2.7%)
#> Low 1/4 (25%) 0/2 0/7
#> Total 4/43 (9.3%) 2/42 (4.8%) 1/44 (2.3%)
#> High
#> Not high 3/42 (7.1%) 3/35 (8.6%) 4/41 (9.8%)
#> High 0/1 0/7 0/3
#> Total 3/43 (7%) 3/42 (7.1%) 4/44 (9.1%)
#> WEEK 2 DAY 15
#> Low
#> Not low 5/29 (17.2%) 2/30 (6.7%) 7/45 (15.6%)
#> Low 1/2 (50%) 0/5 0/7
#> Total 6/31 (19.4%) 2/35 (5.7%) 7/52 (13.5%)
#> High
#> Not high 1/26 (3.8%) 4/33 (12.1%) 4/45 (8.9%)
#> High 0/5 0/2 1/7 (14.3%)
#> Total 1/31 (3.2%) 4/35 (11.4%) 5/52 (9.6%)
#> WEEK 3 DAY 22
#> Low
#> Not low 2/34 (5.9%) 3/34 (8.8%) 1/35 (2.9%)
#> Low 1/3 (33.3%) 0/0 1/4 (25%)
#> Total 3/37 (8.1%) 3/34 (8.8%) 2/39 (5.1%)
#> High
#> Not high 5/33 (15.2%) 5/29 (17.2%) 3/34 (8.8%)
#> High 1/4 (25%) 0/5 0/5
#> Total 6/37 (16.2%) 5/34 (14.7%) 3/39 (7.7%)
#> WEEK 4 DAY 29
#> Low
#> Not low 2/40 (5%) 2/39 (5.1%) 1/38 (2.6%)
#> Low 0/2 1/4 (25%) 0/5
#> Total 2/42 (4.8%) 3/43 (7%) 1/43 (2.3%)
#> High
#> Not high 5/36 (13.9%) 1/34 (2.9%) 6/39 (15.4%)
#> High 1/6 (16.7%) 1/9 (11.1%) 0/4
#> Total 6/42 (14.3%) 2/43 (4.7%) 6/43 (14%)
#> WEEK 5 DAY 36
#> Low
#> Not low 2/35 (5.7%) 6/35 (17.1%) 4/44 (9.1%)
#> Low 1/3 (33.3%) 2/8 (25%) 0/3
#> Total 3/38 (7.9%) 8/43 (18.6%) 4/47 (8.5%)
#> High
#> Not high 4/38 (10.5%) 7/38 (18.4%) 1/41 (2.4%)
#> High 0/0 0/5 0/6
#> Total 4/38 (10.5%) 7/43 (16.3%) 1/47 (2.1%)
#> C-Reactive Protein Measurement
#> WEEK 1 DAY 8
#> Low
#> Not low 4/46 (8.7%) 2/40 (5%) 4/42 (9.5%)
#> Low 0/5 0/2 0/2
#> Total 4/51 (7.8%) 2/42 (4.8%) 4/44 (9.1%)
#> High
#> Not high 6/44 (13.6%) 4/37 (10.8%) 1/35 (2.9%)
#> High 0/7 1/5 (20%) 0/9
#> Total 6/51 (11.8%) 5/42 (11.9%) 1/44 (2.3%)
#> WEEK 2 DAY 15
#> Low
#> Not low 4/39 (10.3%) 3/29 (10.3%) 2/33 (6.1%)
#> Low 1/3 (33.3%) 0/2 0/3
#> Total 5/42 (11.9%) 3/31 (9.7%) 2/36 (5.6%)
#> High
#> Not high 2/36 (5.6%) 3/27 (11.1%) 3/27 (11.1%)
#> High 0/6 1/4 (25%) 0/9
#> Total 2/42 (4.8%) 4/31 (12.9%) 3/36 (8.3%)
#> WEEK 3 DAY 22
#> Low
#> Not low 3/37 (8.1%) 6/46 (13%) 8/44 (18.2%)
#> Low 0/3 0/5 0/6
#> Total 3/40 (7.5%) 6/51 (11.8%) 8/50 (16%)
#> High
#> Not high 2/34 (5.9%) 2/44 (4.5%) 1/43 (2.3%)
#> High 0/6 0/7 0/7
#> Total 2/40 (5%) 2/51 (3.9%) 1/50 (2%)
#> WEEK 4 DAY 29
#> Low
#> Not low 3/42 (7.1%) 1/36 (2.8%) 4/34 (11.8%)
#> Low 0/4 1/2 (50%) 0/5
#> Total 3/46 (6.5%) 2/38 (5.3%) 4/39 (10.3%)
#> High
#> Not high 3/40 (7.5%) 1/35 (2.9%) 5/34 (14.7%)
#> High 1/6 (16.7%) 1/3 (33.3%) 0/5
#> Total 4/46 (8.7%) 2/38 (5.3%) 5/39 (12.8%)
#> WEEK 5 DAY 36
#> Low
#> Not low 5/34 (14.7%) 4/38 (10.5%) 5/41 (12.2%)
#> Low 1/6 (16.7%) 0/4 1/5 (20%)
#> Total 6/40 (15%) 4/42 (9.5%) 6/46 (13%)
#> High
#> Not high 4/35 (11.4%) 4/35 (11.4%) 3/39 (7.7%)
#> High 0/5 0/7 1/7 (14.3%)
#> Total 4/40 (10%) 4/42 (9.5%) 4/46 (8.7%)
#> Immunoglobulin A Measurement
#> WEEK 1 DAY 8
#> Low
#> Not low 2/38 (5.3%) 3/38 (7.9%) 3/30 (10%)
#> Low 1/7 (14.3%) 1/4 (25%) 1/4 (25%)
#> Total 3/45 (6.7%) 4/42 (9.5%) 4/34 (11.8%)
#> High
#> Not high 2/38 (5.3%) 3/37 (8.1%) 1/30 (3.3%)
#> High 2/7 (28.6%) 1/5 (20%) 1/4 (25%)
#> Total 4/45 (8.9%) 4/42 (9.5%) 2/34 (5.9%)
#> WEEK 2 DAY 15
#> Low
#> Not low 2/36 (5.6%) 5/45 (11.1%) 5/43 (11.6%)
#> Low 1/4 (25%) 0/4 1/6 (16.7%)
#> Total 3/40 (7.5%) 5/49 (10.2%) 6/49 (12.2%)
#> High
#> Not high 7/39 (17.9%) 4/44 (9.1%) 5/46 (10.9%)
#> High 0/1 0/5 0/3
#> Total 7/40 (17.5%) 4/49 (8.2%) 5/49 (10.2%)
#> WEEK 3 DAY 22
#> Low
#> Not low 7/43 (16.3%) 4/40 (10%) 2/38 (5.3%)
#> Low 0/5 0/10 2/4 (50%)
#> Total 7/48 (14.6%) 4/50 (8%) 4/42 (9.5%)
#> High
#> Not high 2/41 (4.9%) 5/48 (10.4%) 5/36 (13.9%)
#> High 0/7 0/2 0/6
#> Total 2/48 (4.2%) 5/50 (10%) 5/42 (11.9%)
#> WEEK 4 DAY 29
#> Low
#> Not low 2/29 (6.9%) 7/43 (16.3%) 4/46 (8.7%)
#> Low 0/5 0/10 0/2
#> Total 2/34 (5.9%) 7/53 (13.2%) 4/48 (8.3%)
#> High
#> Not high 6/29 (20.7%) 4/49 (8.2%) 3/44 (6.8%)
#> High 0/5 1/4 (25%) 1/4 (25%)
#> Total 6/34 (17.6%) 5/53 (9.4%) 4/48 (8.3%)
#> WEEK 5 DAY 36
#> Low
#> Not low 4/41 (9.8%) 6/39 (15.4%) 5/38 (13.2%)
#> Low 0/2 0/5 0/2
#> Total 4/43 (9.3%) 6/44 (13.6%) 5/40 (12.5%)
#> High
#> Not high 3/37 (8.1%) 5/39 (12.8%) 4/38 (10.5%)
#> High 0/6 0/5 1/2 (50%)
#> Total 3/43 (7%) 5/44 (11.4%) 5/40 (12.5%)