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VST02 Vital Sign Abnormalities Table.

Source: R/vst02.R
vst02_1.Rd

Vital Sign Parameters outside Normal Limits Regardless of Abnormality at Baseline.

Usage

vst02_1_main(
  adam_db,
  arm_var = "ACTARM",
  lbl_overall = NULL,
  exclude_base_abn = FALSE,
  ...
)

vst02_pre(adam_db, ...)

vst02_post(tlg, prune_0 = FALSE, ...)

vst02_1

Format

An object of class chevron_t of length 1.

Arguments

adam_db

(list of data.frames) object containing the ADaM datasets

arm_var

(string) variable used for column splitting

lbl_overall

(string) label used for overall column, if set to NULL the overall column is omitted

exclude_base_abn

(flag) whether baseline abnormality should be excluded.

...

not used.

tlg

(TableTree, Listing or ggplot) object typically produced by a main function.

prune_0

(flag) remove 0 count rows

Value

the main function returns an rtables object.

the preprocessing function returns a list of data.frame.

the postprocessing function returns an rtables object or an ElementaryTable (null report).

Details

  • Only count LOW or HIGH values.

  • Results of "LOW LOW" are treated as the same as "LOW", and "HIGH HIGH" the same as "HIGH".

  • Does not include a total column by default.

  • Does not remove zero-count rows unless overridden with prune_0 = TRUE.

Functions

  • vst02_1_main(): Main TLG function

  • vst02_pre(): Preprocessing

  • vst02_post(): Postprocessing

Note

  • adam_db object must contain an advs table with the "PARAM", "ANRIND" and "BNRIND" columns.

Examples

run(vst02_1, syn_data)
#>   Assessment                   A: Drug X      B: Placebo     C: Combination
#>    Abnormality                  (N=15)          (N=15)           (N=15)    
#>   —————————————————————————————————————————————————————————————————————————
#>   Diastolic Blood Pressure                                                 
#>     Low                      8/15 (53.3%)     9/15 (60%)      8/15 (53.3%) 
#>     High                     10/15 (66.7%)   5/15 (33.3%)     8/15 (53.3%) 
#>   Pulse Rate                                                               
#>     Low                       9/15 (60%)      3/15 (20%)      5/15 (33.3%) 
#>     High                     2/15 (13.3%)     6/15 (40%)      5/15 (33.3%) 
#>   Respiratory Rate                                                         
#>     Low                      13/15 (86.7%)   10/15 (66.7%)   13/15 (86.7%) 
#>     High                     7/15 (46.7%)    10/15 (66.7%)   11/15 (73.3%) 
#>   Systolic Blood Pressure                                                  
#>     Low                      7/15 (46.7%)     9/15 (60%)     11/15 (73.3%) 
#>     High                     10/15 (66.7%)    9/15 (60%)       9/15 (60%)  
#>   Temperature                                                              
#>     Low                       12/15 (80%)    13/15 (86.7%)   11/15 (73.3%) 
#>     High                     14/15 (93.3%)    12/15 (80%)    14/15 (93.3%) 
#>   Weight                                                                   
#>     Low                       3/15 (20%)      3/15 (20%)      4/15 (26.7%) 
#>     High                     4/15 (26.7%)    4/15 (26.7%)     5/15 (33.3%)